Conner Kummerlowe

Conner Kummerlowe

Former Graduate Student

Degrees & Affiliations

BS, Chemistry - Pomona College MPhil, Computational Biology - Cambridge University PhD Candidate, Computational & Systems Biology - MIT

Background & Interests

Biology Biology
Computational Methods Computational Methods
Infectious Disease Infectious Disease
Outdoor Adventures Outdoor Adventures
Statistics Statistics
Too Many Cooks Too Many Cooks
Travel Travel

Biography

Conner is a PhD student in Computational and Systems Biology. He is interested in applying single-cell genomics and computational methods to better understand infectious diseases. Conner grew up in the rainy and forested suburbs of Seattle, before moving to warmer climes to complete his undergraduate studies at Pomona College in Southern California. He obtained his bachelor’s in Chemistry but completed extensive coursework in mathematics and computer science. At the end of his undergraduate he moved to the UK to further his computational skills by completing a masters degree in computational biology at the University of Cambridge. Afterwards, he decided to see what the eastern coast of the US is all about and started his PhD at MIT. Thanks to his west coast upbringing, Conner loves the outdoors. His favorite activities include hiking, backpacking, climbing, running, biking, cooking, and writing.

Publications

Compressed phenotypic screens for complex multicellular models and high-content assays
Compressed phenotypic screens for complex multicellular models and high-content assays
  • Mead et al.,
  • bioRxiv,
  • 2023
Biology Biology
Cancer Cancer
Chemistry Chemistry
Computational Methods Computational Methods
Genomics Genomics
R&D R&D
Statistics Statistics
Technology Technology
Alex K. Shalek Alex K. Shalek
Ben Mead Ben Mead
Conner Kummerlowe Conner Kummerlowe
Ivy Liu Ivy Liu
Peter Winter Peter Winter
Thomas Nok Hin Cheng Thomas Nok Hin Cheng
Walaa Kattan Walaa Kattan
Single-cell profiling of environmental enteropathy reveals signatures of epithelial remodeling and immune activation
Single-cell profiling of environmental enteropathy reveals signatures of epithelial remodeling and immune activation
  • Kummerlowe et al.,
  • Science Translational Medicine,
  • 2022
Biology Biology
Cell Atlas Cell Atlas
Genomics Genomics
Immunology Immunology
Infectious Disease Infectious Disease
Microbiology Microbiology
Alex K. Shalek Alex K. Shalek
Benjamin Doran Benjamin Doran
Conner Kummerlowe Conner Kummerlowe
Ira Fleming Ira Fleming
José Ordovas-Montañes José Ordovas-Montañes
Marc Wadsworth II Marc Wadsworth II
Marko Vukovic Marko Vukovic
Nolawit Mulugeta Nolawit Mulugeta
Toby Aicher Toby Aicher
Travis Hughes Travis Hughes
Multimodal profiling of lung granulomas in macaques reveals cellular correlates of tuberculosis control
Multimodal profiling of lung granulomas in macaques reveals cellular correlates of tuberculosis control
  • Gideon et al.,
  • Immunity,
  • 2022
Biology Biology
Cell Atlas Cell Atlas
Genomics Genomics
Immunology Immunology
Infectious Disease Infectious Disease
Microbiology Microbiology
Alex K. Shalek Alex K. Shalek
Conner Kummerlowe Conner Kummerlowe
Constantine Tzouanas Constantine Tzouanas
José Ordovas-Montañes José Ordovas-Montañes
Marc Wadsworth II Marc Wadsworth II
Samira Ibrahim Samira Ibrahim
Sarah Nyquist Sarah Nyquist
Travis Hughes Travis Hughes
Screening for modulators of the cellular composition of gut epithelia via organoid models of intestinal stem cell differentiation
Screening for modulators of the cellular composition of gut epithelia via organoid models of intestinal stem cell differentiation
  • Mead et al.,
  • Nature Biomedical Engineering,
  • 2022
Biology Biology
Computational Methods Computational Methods
Genomics Genomics
Immunology Immunology
Medicine Medicine
R&D R&D
Technology Technology
Alex K. Shalek Alex K. Shalek
Ben Mead Ben Mead
Conner Kummerlowe Conner Kummerlowe
José Ordovas-Montañes José Ordovas-Montañes
Marko Vukovic Marko Vukovic
Single-cell profiling of environmental enteropathy reveals signatures of epithelial remodeling and immune activation in severe disease
Single-cell profiling of environmental enteropathy reveals signatures of epithelial remodeling and immune activation in severe disease
  • Kummerlowe et al.,
  • bioRxiv,
  • 2021
Biology Biology
Genomics Genomics
Immunology Immunology
Infectious Disease Infectious Disease
Alex K. Shalek Alex K. Shalek
Benjamin Doran Benjamin Doran
Conner Kummerlowe Conner Kummerlowe
Ira Fleming Ira Fleming
José Ordovas-Montañes José Ordovas-Montañes
Marko Vukovic Marko Vukovic
Nolawit Mulugeta Nolawit Mulugeta
Travis Hughes Travis Hughes
Single-cell profiling of tuberculosis lung granulomas reveals functional lymphocyte signatures of bacterial control
Single-cell profiling of tuberculosis lung granulomas reveals functional lymphocyte signatures of bacterial control
  • Gideon et al.,
  • bioRxiv,
  • 2020
Biology Biology
Cell Atlas Cell Atlas
Genomics Genomics
Immunology Immunology
Infectious Disease Infectious Disease
Alex K. Shalek Alex K. Shalek
Conner Kummerlowe Conner Kummerlowe
José Ordovas-Montañes José Ordovas-Montañes
Marc Wadsworth II Marc Wadsworth II
Sarah Nyquist Sarah Nyquist
Travis Hughes Travis Hughes