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Single-cell profiling of environmental enteropathy reveals signatures of epithelial remodeling and immune activation
Kummerlowe et al.,
Science Translational Medicine,
2022
Biology
Cell Atlas
Genomics
Immunology
Infectious Disease
Microbiology
Alex K. Shalek
Benjamin Doran
Conner Kummerlowe
Ira Fleming
José Ordovas-Montañes
Marc Wadsworth II
Marko Vukovic
Nolawit Mulugeta
Toby Aicher
Travis Hughes
Deciphering the immunopeptidome in vivo reveals new tumour antigens
Jaeger et al.,
Nature,
2022
Biology
Cancer
Genomics
Immunology
Alex K. Shalek
Peter Winter
How to ensure the Human Cell Atlas benefits humanity
Majumder et al.,
Nature,
2022
Cell Atlas
Alex K. Shalek
Multimodal profiling of lung granulomas in macaques reveals cellular correlates of tuberculosis control
Gideon et al.,
Immunity,
2022
Biology
Cell Atlas
Genomics
Immunology
Infectious Disease
Microbiology
Alex K. Shalek
Conner Kummerlowe
Constantine Tzouanas
José Ordovas-Montañes
Marc Wadsworth II
Samira Ibrahim
Sarah Nyquist
Travis Hughes
A single-cell liver atlas of Plasmodium vivax infection
Mancio-Silva et al.,
Cell Host & Microbe,
2022
Biology
Cell Atlas
Genomics
Immunology
Infectious Disease
Microbiology
Technology
Alex K. Shalek
Marc Wadsworth II
Travis Hughes
Cellular and transcriptional diversity over the course of human lactation
Nyquist et al.,
PNAS,
2022
Biology
Cell Atlas
Genomics
Immunology
Medicine
Alex K. Shalek
Ben Mead
Brittany Goods
Kellie Kolb
Patricia Gao
Riley Drake
Sarah Nyquist
Screening for modulators of the cellular composition of gut epithelia via organoid models of intestinal stem cell differentiation
Mead et al.,
Nature Biomedical Engineering,
2022
Biology
Computational Methods
Genomics
Immunology
Medicine
R&D
Technology
Alex K. Shalek
Ben Mead
Conner Kummerlowe
José Ordovas-Montañes
Marko Vukovic
JAK inhibition in a patient with a STAT1 gain-of-function variant reveals STAT1 dysregulation as a common feature of aplastic anemia
Rosenberg et al.,
Med,
2022
Biology
Genomics
Immunology
Medicine
Alex K. Shalek
Travis Hughes
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states
Song et al.,
Nature Communications,
2022
Biology
Cancer
Genomics
Immunology
R&D
Alex K. Shalek
Marc Wadsworth II
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Cancer
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